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Arabidopsis database

WebEukaryotic Promoter Database (EPD) Genevisible Expression Data The Subcellular Location of Proteins in Arabidopsis Database (SUBA) TraVA:Transcription Variation Analysis: Gene Families Links moved to Gene Families band [show me where] Genomics AceView Gramene MIPS NCBI-Entrez Gene Thalemine at BAR: Interactions BioGRID: … WebThe Arabidopsis PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets. Publicly-available Arabidopsis thaliana columbia-0 datasets were downloaded from ProteomeXchange and reprocessed from the raw files using the Trans-Proteomic Pipeline suite of tools. A publication …

Publication : HASTY, the Arabidopsis ortholog of exportin …

Web29 dic 2024 · Introduction. Highly organized structural features of the Arabidopsis root apical meristem (RAM) make it a valuable model system for investigating how stem cells drive creation of differentiated tissues (Drapek et al., 2024).The RAM consists of a stem cell niche located near the tip of the root that is protected from below by cells that are … WebHere, we develop an Arabidopsis hormone database (AHD), which aims to provide a systematic and comprehensive view of genes participating in plant hormonal regulation, as well as morphological phenotypes controlled by plant hormones. Based on data from mutant studies, transgenic analysis and gene ontology annotation, we have identified a total ... bphc health center data https://mattbennettviolin.org

PhosPhAt: a database of phosphorylation sites in Arabidopsis …

Web24 ott 2016 · Users can either display a list of studies or a list of phenotypes in table form. The primary purpose of the database is to serve as a central repository for all A. thaliana … WebArabidopsis: [noun] a small genus of annual or biennial herbs (family Brassicaceae) of north temperate regions with basal rosettes of petioled leaves, cauline leaves short … Web22 nov 2024 · Arabidopsis thaliana is a flowering plant with a short but complex life cycle. ... They were then searched against a proteome database constructed using six-frame translation of the TAIR9 genome. gyms in beaufort nc

TAIR- Metabolomics Resources- Data Repositories - Arabidopsis

Category:TAIR - Home Page - Arabidopsis

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Arabidopsis database

Plant Public RNA‐seq Database: a comprehensive online database …

Web1996: Arabidopsis Genome Initiative organized. 1995: Standard BAC and P1 libraries constructed. 1994: cDNA sequencing efforts initiated . 1993: High-efficiency … WebProof-of-concept analysis suggests that the MeKO database is highly useful for the generation of hypotheses for genes of interest and for improving gene annotation. MetabolomeExpress Provides a public metabolomics data repository and processing pipeline enabling web-based processing, analysis and transparent dissemination of …

Arabidopsis database

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Web1 feb 2015 · EPD selection tool: Promoter subset selection based on EPD-supplied annotation. ChIP-Cor: Promoter subset selection based on experimental data or genome … WebOur previous Arabidopsis RNA-seq database (ARS) has been updated recently, and the number of libraries has been increased from 20 068 to 28 164 (Zhang et al., 2024). We …

WebThe Arabidopsis Information Resource (TAIR) is a highly sophisticated, extensive, ... protein, expression and community data in the form of a relational database. These data can be searched, downloaded and analysed using the tools provided. Here, the simple search (for retrieval of information), Seq Viewer ... WebProof-of-concept analysis suggests that the MeKO database is highly useful for the generation of hypotheses for genes of interest and for improving gene annotation. …

Web23 ott 1998 · Arabidopsis thaliana is a small plant in the mustard family that has become the model system of choice for research in plant biology. ... Between 1971 and 1994 there were 16 patents in the U.S. Patent Database that included the word Arabidopsis. From 1995 to present this number increased to 156. Google Scholar. 40. Schena M., et al., ... Web16 mag 2009 · We developed a database of higher plants' UPS, ... (E2), and ubiquitin protein ligase (E3). There are approximately 1300 E3s in the Arabidopsis genome, and similarly large numbers in other plants. However, in most plant species, the genome-wide classification and annotation of UPS genes, especially E3 families, ...

Web1 gen 2013 · Typically, databases have three components: the database software for storing data, software that translates and executes requests (queries), and software applications that allow users to view data. This section describes three commonly used Arabidopsis resources. Additional databases can be found in Table 1.

http://plantgdb.org/AtGDB/ bphc healthy homesWebArabidopsis thaliana taxonomy: taxonomy/phylogenetic: Arctos Specimen Database: Arabidopsis thaliana col: organism-specific: BioCyc: 28 records from this provider: supplemental materials: Dryad Digital Repository: Arabidopsis thaliana (L.) Heynh. taxonomy/phylogenetic: Encyclopedia of life: 35 records from this provider: organism … bphc health centerWebOur previous Arabidopsis RNA-seq database (ARS) has been updated recently, and the number of libraries has been increased from 20 068 to 28 164 (Zhang et al., 2024). We also plan to continue updating PPRD regularly by including new libraries and … gyms in beech grove indianaWebAbout TAIR The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana.Data … Browse old Arabidopsis publications only available as electronic files. The … Tools Overview. This page provides links to all the analysis and visualization tools … Information on Arabidopsis high throughput expression data, such as microarrays, … Contains data files (including pathways, reactions, enzymes and loci) from the … For inclusion on the TAIR Arabidopsis Gene Family page. Gene Function Submission … This page provides news and events for the Arabidopsis research community. TAIR … About TAIR The Arabidopsis Information Resource (TAIR) maintains a database … This section of TAIR's website contains links to documents to help you … bphc hrsa covid surveyhttp://travadb.org/ gyms in beach haven njWebname type polymorphism site gene names allele type ; GABI_004C08 : insertion : intron : AT2G07667.1, AT2G07667.2 : unknown: GABI_269H08 : insertion : intron gyms in benallaWebArabidopsis thaliana is a long established model species for plant molecular biology, genetics and genomics, ... These potentially represent novel spliced genes that are not included in the TAIR10 database. These data are housed in … bphc intranet